046831 - Introduction to Medical Imaging - spring

Topic outline

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  Introduction to Medical Imaging course 046831 Spring 2010

  • Announcements Forum
  • Course Staff Page
  • Schedule Page
  • Information Page File
  • Find a partner Forum
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  Topic 1

  Lecture Notes

  • List of Lectures File
  • Introduction File
  • Enhancement, Restoration, Conversion File
  • Edge Detection File
  • Curvature Flow File
  • Calculus of variations File
  • Principle of least action File
  • Introduction to Segmentation File
  • Level Sets File
  • Active Contours File
  • Mumford Shah Examples File
  • Conformal Snakes File
  • Bayesian Segmentation File
  • Bayesian Segmentation (2) File
  • Introduction to registration File
  • Conformal mappings for Registration and Warping File
  • Cotangent Formula File
  • Optimal Mass Transport for Registration and Warping File
  • Optimal Mass Transport for Registration and Warping (2) File
  • Slides File
  • Medical Imaging Modalities File
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  Topic 2

  Class Exercises

  • Numerical Schemes File
  • Partial Differential Equations File
  • Propagating Interfaces File
  • movie File
  • Active Contours File
  • Segmentation Methods File
  • Conformal Mapping File
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  Topic 3

  Homework Assignments

  • Exercise #1 File
  • Exercise #2 File
  • Exercise #3 File
  • Data File
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  Topic 4

  Project Papers

  • Mathematical Methods in Medical Image Processing File
  • Despeckling of Medical Ultrasound Images File
  • Multigrid Computation of Rotationally Invariant Non-Linear Optical Flow File
  • Conformal Curvature Flows: From Phase Transition to Active Vision File
  • Advanced Nonrigid Registration Algorithms for Image Fusion File
  • Knowledge-Based Segmentation of SAR Data with Learned Priors File
  • Image Segmentation using Active Contours Driven by the Bhattacharyya Gradient Flow File
  • Active Contours without Edges File
  • Finsler Active Contours for Directional Segmentation File
  • A Geometric Snake Model for Segmentation of Medical Imagery File
  • On the Laplace–Beltrami Operator and Brain Surface Flattening File
  • Flattening Maps for the Visualization of Multibranched Vessels File
  • Nondistorting Flattening Maps and the 3-D Visualization of Colon CT Images File
  • Images File
  • An Image Morphing Technique Based on Optimal Mass Preserving Mapping File
  • Mass Preserving Registration for Heart MR Images File
  • Optimal Mass Transport for Registration and Warping File
  • Coronary vessel cores from 3D imagery: a topological approach File
  • Multiscale 3D Shape Analysis Using Spherical Wavelets File
  • Multiscale 3-D Shape Representation and Segmentation Using Spherical Wavelets File
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  Topic 5

  Links

  • 3D Slicer URL
  • The 3D Slicer is freely available, open-source software for visualization, registration, segmentation, and quantification of medical data.
  • VTK URL
  • An open source, freely available software system for 3D computer graphics, image processing, and visualization.
  • ITK URL
  • ITK is an open-source software system, which employs leading-edge segmentation and registration algorithms in two, three, and more dimensions.
  • SPL Anatomy Browser URL
  • (including a brain atlas).
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  Topic 6

  Grades